Table of Contents
=================

.. toctree::
   :maxdepth: 2
   :numbered:

   index.md

   code-of-conduct.rst

   jetstream/boot.md

   jetstream/login.md

   running-command-line-blast.md

   visualizing-blast-scores-with-RStudio.md

   quality-and-trimming.md

   mapping-variant-calling.md

   rna-seq.md

   transcriptome-assembly.md

   genome-assembly.md

   jetstream-bioconda-config.md

   rmarkdown_rnaseq.md
   
   chip-seq
   
   dammit_annotation.md
   
   where_to_put_data.md