FastQCFastQC Report
Wed 10 Jul 2019
BCep_R2_paired.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBCep_R2_paired.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1214720
Sequences flagged as poor quality0
Sequence length140-151
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAGGG2955.9380545E-722.128008145
TAGGGAA2504.385261E-520.888842145
GGAAGAG11201.6114427E-713.988062145
CGGAATT8150.0055075187.9640283
GTAGGGA2701.1401072E-47.3088517140-144
GTGTAGG4706.386472E-97.1054955140-144
AGATCGG34906.728955E-55.985341145
AGGGAAA4756.430177E-45.113237140-144
ATCGGAA13550.05.041303140-144
Produced by FastQC (version 0.11.5)