Basic Statistics
Measure | Value |
---|---|
Filename | BCep_R1_paired.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1214720 |
Sequences flagged as poor quality | 0 |
Sequence length | 140-151 |
%GC | 67 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGAAC | 520 | 2.8047414E-4 | 11.089581 | 145 |
ACGTCTG | 675 | 1.3097633E-7 | 6.4073133 | 145 |
GTCTGAA | 495 | 5.2171345E-7 | 6.3096647 | 140-144 |
GTACACG | 1540 | 0.001078257 | 6.0778546 | 8 |
CGTCTGA | 550 | 3.4155655E-6 | 5.678699 | 140-144 |
CACGTCT | 650 | 3.595287E-7 | 5.5258107 | 140-144 |
GCCACGA | 1700 | 0.003502867 | 5.5060477 | 1 |
ATCGGAA | 1255 | 0.0 | 5.47508 | 140-144 |
AAGAGCA | 830 | 6.640403E-8 | 5.080041 | 140-144 |