Basic Statistics
Measure | Value |
---|---|
Filename | BCep_R2_paired.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1214720 |
Sequences flagged as poor quality | 0 |
Sequence length | 140-151 |
%GC | 67 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGTAGGG | 295 | 5.9380545E-7 | 22.128008 | 145 |
TAGGGAA | 250 | 4.385261E-5 | 20.888842 | 145 |
GGAAGAG | 1120 | 1.6114427E-7 | 13.988062 | 145 |
CGGAATT | 815 | 0.005507518 | 7.964028 | 3 |
GTAGGGA | 270 | 1.1401072E-4 | 7.3088517 | 140-144 |
GTGTAGG | 470 | 6.386472E-9 | 7.1054955 | 140-144 |
AGATCGG | 3490 | 6.728955E-5 | 5.985341 | 145 |
AGGGAAA | 475 | 6.430177E-4 | 5.113237 | 140-144 |
ATCGGAA | 1355 | 0.0 | 5.041303 | 140-144 |