Basic Statistics
Measure | Value |
---|---|
Filename | B_cepacia_raw_R1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2500000 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 68 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTAGACG | 210 | 0.0064356485 | 6.9051547 | 125-129 |
CTACAAC | 1340 | 0.001397282 | 6.493167 | 1 |
TACAACG | 1420 | 0.0026836796 | 6.1272326 | 2 |
TCACTAA | 345 | 0.003843922 | 5.463992 | 130-134 |
CTAATCG | 415 | 0.0010878785 | 5.241053 | 135-139 |
GTCGGAA | 2015 | 0.00427169 | 5.037709 | 1 |